RT Journal Article T1 Ancestry Analysis in the 11-M Madrid Bomb Attack Investigation A1 Phillips, Christopher Paul A1 Prieto, Lourdes A1 Fondevila Álvarez, Manuel A1 Salas Ellacuriaga, Antonio A1 Gómez Tato, Antonio A1 Álvarez Dios, José Antonio A1 Alonso, Antonio A1 Blanco Verea, Alejandro José A1 Brión Martínez, María José A1 Montesino, Marta A1 Carracedo Álvarez, Ángel A1 Lareu Huidobro, María Victoria AB The 11-M Madrid commuter train bombings of 2004 constituted the second biggest terrorist attack to occur in Europe after Lockerbie, while the subsequent investigation became the most complex and wide-ranging forensic case in Spain. Standard short tandem repeat (STR) profiling of 600 exhibits left certain key incriminatory samples unmatched to any of the apprehended suspects. A judicial order to perform analyses of unmatched samples to differentiate European and North African ancestry became a critical part of the investigation and was instigated to help refine the search for further suspects. Although mitochondrial DNA (mtDNA) and Y-chromosome markers routinely demonstrate informative geographic differentiation, the populations compared in this analysis were known to show a proportion of shared mtDNA and Y haplotypes as a result of recent gene-flow across the western Mediterranean, while any two loci can be unrepresentative of the ancestry of an individual as a whole. We based our principal analysis on a validated 34plex autosomal ancestry-informative-marker single nucleotide polymorphism (AIM-SNP) assay to make an assignment of ancestry for DNA from seven unmatched case samples including a handprint from a bag containing undetonated explosives together with personal items recovered from various locations in Madrid associated with the suspects. To assess marker informativeness before genotyping, we predicted the probable classification success for the 34plex assay with standard error estimators for a naïve Bayesian classifier using Moroccan and Spanish training sets (each n = 48). Once misclassification error was found to be sufficiently low, genotyping yielded seven near-complete profiles (33 of 34 AIM-SNPs) that in four cases gave probabilities providing a clear assignment of ancestry. One of the suspects predicted to be North African by AIM-SNP analysis of DNA from a toothbrush was identified late in the investigation as Algerian in origin. The results achieved illustrate the benefit of adding specialized marker sets to provide enhanced scope and power to an already highly effective system of DNA analysis for forensic identification. PB PLOS YR 2009 FD 2009 LK http://hdl.handle.net/10347/22892 UL http://hdl.handle.net/10347/22892 LA eng NO Phillips C, Prieto L, Fondevila M, Salas A, Gómez-Tato A, Álvarez-Dios J, et al. (2009) Ancestry Analysis in the 11-M Madrid Bomb Attack Investigation. PLoS ONE 4(8): e6583. https://doi.org/10.1371/journal.pone.0006583 NO European Commission GROWTH program, SNPforID project, contract G6RD-CT-2002-00844 to CP. Xunta de Galicia, Spain: Fund PGIDTIT06PXIB228195PR and Ministerio de Educación y Ciencia, Spain: project BIO2006-06178 to MVL. Fundación de Investigación Médica Mutua Madrileña, Spain: 2006/CL370 and 2008/CL444 to AS. Continued development of the work and its application to forensic analysis is being funded by Allelyus, Santiago de Compostela, Spain DS Minerva RD 2 may 2026